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[1].
Suoqin Jin
, Dingjie Wang
和 Xiufen Zou.
Trajectory Control in Nonlinear Networked Systems And Its Applications To Complex Biological Systems.
SIAM J. Appl. Math..
78
(1).
629—649.
2018.
-
[2].
Dingjie Wang
和 Xiufen Zou.
A new centrality measure of nodes in multilayer networks under the framework of tensor computation.
Applied Mathematical Modelling.
54.
46–63.
2018.
-
[3].
Wei Zheng
, Dingjie Wang
和 Xiufen Zou.
Control of multilayer biological networks and applied to target identification of complex diseases.
BMC Bioinformatics.
20.
271.
2019.
-
[4].
Xiao Tu
, Qinran Zhang
, Wei Zhang
和 Xiufen Zou.
Single-cell data-driven mathematical model reveals possible molecular mechanisms of embryonic stem-cell differentiation.
Mathematical Biosciences and Engineering.
16
(5).
5877–5896.
2019.
-
[5].
Yuewu Liu
和 Xiufen Zou.
A new model system for exploring assembly mechanisms for HIV-1 immature capsid in vivo.
Bulletin of Mathematical Biology.
81
(5).
1506–1526.
2019.
-
[6].
Anjing Fan
, Haitao Wang
, Hua Xiang
和 Xiufen Zou.
Inferring large-scale gene regulatory networks using a randomized algorithm based on singular value decomposition.
IEEE/ACM Transactions on Computational Biology and Bioinformatics.
16
(6).
1997-2008.
2019.
-
[7].
Dingjie Wang
, Wei Yu
和 Xiufen Zou.
Tensor-based mathematical framework and new centralities of temporal multilayer networks.
Information Sciences.
512.
563–580.
2020.
-
[8].
Dingjie Wang
, Xiufen Zou
和 Kin Fai Au .
A network-based computational framework to predict and differentiate functions for gene isoforms using exon-level expression data.
Methods.
189.
54-64.
2020.
-
[9].
Xiaoying Zheng
, Suoqin Jin
, Qing Nie
和 Xiufen Zou.
scRCMF: Identification of Cell Subpopulations and Transition States From Single-Cell Transcriptomes.
IEEE Transactions on Biomedical Engineering.
67
(5).
1418-1428.
2020.
-
[10].
Xiao Zheng
, Yuan Huang
和 Xiufen Zou.
scPADGRN: A preconditioned ADMM approach for reconstructing dynamic gene regulatory network using single-cell RNA sequencing data.
PloS Comput Biol.
16
(7).
e1007471.
2020.
-
[11].
Jie Yang
, Chen Ma
, Yu Zhao
, Anjing Fan
, Xiufen Zou
和 Zishu Pan.
Hepatitis B virus core particles containing a conserved region of the G protein combined with interleukin-35 protected mice against respiratory syncytial virus infection without vaccine-enhanced immunopathology.
Journal of Virology.
94
(13).
e00007-20.
2020.
-
[12].
Zhihao Yao
, Jing Zhang
和 Xiufen Zou.
A general index for linear and nonlinear correlations for high dimensional genomic data.
BMC Genomics.
21
(1).
846.
2020.
-
[13].
Wei Zhang
, Yuanyuan Li
和 Xiufen Zou.
SCCLRR: A Robust Computational Method for Accurate Clustering Single Cell RNA-seq Data.
IEEE Journal of Biomedical and Health Informatics.
25
(1).
247-256.
2021.
-
[14].
Chen Ma
, Zhihao Yao
, Qinran Zhang
和 Xiufen Zou.
Quantitative integration of radiomic and genomic data improves survival prediction of low-grade glioma patients.
MATHEMATICAL BIOSCIENCES AND ENGINEERING.
18
(1).
727-744.
2020.
-
[15].
Alan Sariol
, Samantha Mackin
, Juan E. Abrahante
, Chen Ma
, Yu Zhou
, Qinran Zhang
, Xiufen Zou
, Merri-Grace Allred
, David K. Meyerholz
和 Stanley Perlman.
Microglia depletion exacerbates demyelination and impairs remyelination in a neurotropic coronavirus infection,.
Proceedings of the National Academy of Sciences of the United States of America ( PNAS).
117
(39).
24464-24474.
2020.
-
[16].
Yu Zhou
, Mingzan Huang
, Yingan Jiang
和 Xiufen Zou.
Data-Driven Mathematical Modeling and Dynamical Analysis for SARS-CoV-2 Coinfection with Bacteria.
International Journal of Bifurcation and Chaos.
31
(11).
2150163.
2021.
-
[17].
Shun Wang
, Mengqian Hao
, Zishu Pan
, Jinzhi Lei
和 Xiufen Zou.
Data-driven multi-scale mathematical modeling of SARS-CoV-2 infection reveals heterogeneity of COVID-19 patients.
PLOS Computational Biology.
17
(11).
e1009587.
2021.
-
[18].
Mengqian Hao
, Xiufen Zou
和 Suoqin Jin..
Identification of Intercellular Signaling Changes Across Conditions and Their Influence on Intracellular Signaling Response From Multiple Single Cell Datasets.
Frontiers in Genetics.
12.
751158.
2021.
-
[19].
Ruiyang Liu
, Shun Wang
, Xuewen Tan
和 Xiufen Zou.
Identifying optimal adaptive therapeutic schedules for prostate cancer through combining mathematical modeling and dynamic optimization.
Applied Mathematical Modelling.
107.
688-700.
2022.
-
[20].
Sicheng Li
, Shun Wang
和 Xiufen Zou.
Data-driven mathematical modeling and quantitative analysis of cell dynamics in the tumor microenvironment,.
Computers and Mathematics with Applications.
113.
300-314.
2022.
-
[21].
Zhijie Ni
, Xiaoying Zheng
, Xiao Zheng
和 Xiufen Zou.
scLRTD : A Novel Low Rank Tensor Decomposition Method for Imputing Missing Values in Single-Cell Multi-Omics Sequencing Data.
IEEE/ACM Transactions on Computational Biology and Bioinformatics.
19
(2).
1144-1153.
2022.
-
[22].
Yuyang Xiao
, Juan Shen
和 Xiufen Zou.
Mathematical modeling and dynamical analysis of anti-tumor drug dose-response.
Mathematical Biosciences and Engineering.
19
(4).
4120–4144.
2022.
-
[23].
Jingren Niu
, Qing Tan
, Xiufen Zou
和 Suoqin Jin.
Accurate prediction of glioma grades from radiomics using a multi-filter and multi-objective-based method.
Mathematical Biosciences and Engineering.
20
(2).
2890–2907.
2022.
-
[24].
Qinran Zhang
, Suoqin Jin
和 Xiufen Zou.
scAB detects multiresolution cell states with clinical significance by integrating single-cell genomics and bulk sequencing data,.
Nucleic Acids Research.
50
(21).
12112–12130.
2022.
-
[25].
Qinran Zhang
, Yuhong Xu
, Shiyang Kang
, Zhihao Yao
, Haitao Wang
, Qinian Wu
, Qi Zhao
, Junquan Chen
, Qihua Zhang
, Rui‐hua Xu
, Xiufen Zou
和 Huiyan Luo.
A novel computational framework for integrating multidimensional data to enhance accuracy in predicting the prognosis of colorectal cancer.
MedComm – Future Med.
e27.
1-13.
2022.
-
[26].
Chang Hu
, Qing Tan
, Qinran Zhang
, Yiming Li
, Fengyun Wang
, Xiufen Zou
和 Zhiyong Peng.
Application of interpretable machine learning for early prediction of prognosis in acute kidney injury.
Computational and Structural Biotechnology Journal.
20.
2861–2870.
2022.